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The divine atom is that part of the body with which the Overself is most directly associated, and that is why it is placed in the heart, but of course, the Overself is associated with the whole body. There is a scientific explanation why the heart is the spiritual centre of the body and why the brain is the mental centre, and this is given in The Wisdom of the Overself.

-- Notebooks Category 4: Elementary Meditation > Chapter 3 : Fundamentals > # 208